I've uploaded the updated queries. I'm not entirely satisfied with the solution as it requires a little data manipulation in Excel. I ran out of time, though, so I'm uploading as is. Download here:
http://forums.nbn.org.uk/uploads.php?file=MM%20to%20R6.zip
Be sure to read the instructions. Pay particular attention to the note at the end of the Word doc entitled Importing a file from a MapMate user. This manual manipulation is essential as there must be only one space between an abundance value and its qualifier. If there are more spaces, the new IW will interpret the second space as an abundance delimiter. Once you're in the IW, it will ask you to match the space-less qualifiers with real ones.
Hope that makes sense. Let me know if you have any questions at all.
Charles
Charles Roper
Digital Development Manager | Field Studies Council
http://www.field-studies-council.org | https://twitter.com/charlesroper | https://twitter.com/fsc_digital